PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast02G009100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 415aa    MW: 44756.1 Da    PI: 4.5425
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast02G009100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.23.5e-15131622128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk.sgyWk.atgkd 89 
                         p+ ++FhPtd ++v +yL + + g +++  +vi   d  ++ P++L  k+ ++++++ +f ++   k+++g r+ ra++  g W+ ++g  
  Brast02G009100.1.p  13 PAALKFHPTDAQIVAQYLVPLALGLPNPNPRVILIDDPASLPPKELLvKHGHGGSHHAFFLCPPTDKSRNGGRRDRAIRgGGSWSgEKGVV 103
                         6789**********************9999999999**********834444566688******************7764889*9656665 PP

                 NAM  90 kevlsk......kgelvglkk.tLvfy..............kgrapkgektdWvmheyrl 128
                         k+++        ++ +v  kk  L++               k  + k+  + Wvmhe++l
  Brast02G009100.1.p 104 KQLILLrdggggGELHVEYKKyNLTYRvdgdddddgggkkgK-GKGKAPAAGWVMHEFQL 162
                         554443477765333355555167777888888877554221.223334799******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.15E-2110178IPR003441NAC domain
PROSITE profilePS5100518.78612179IPR003441NAC domain
PfamPF023651.6E-914162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MEASRFGFDP GTPAALKFHP TDAQIVAQYL VPLALGLPNP NPRVILIDDP ASLPPKELLV  60
KHGHGGSHHA FFLCPPTDKS RNGGRRDRAI RGGGSWSGEK GVVKQLILLR DGGGGGELHV  120
EYKKYNLTYR VDGDDDDDGG GKKGKGKGKA PAAGWVMHEF QLVHPASLSG AVISRIKLTD  180
RKLKEEENLM NEQSVQDQHD DYQMSPSYQM GYPPDQLYQV GEPGPGCQIE YQPGLSYQMG  240
EPGPSYQMGE PGPSCQMGYQ PGSSYQMGEP GPSYHMGELG PSYQMGYQPG SNYQMGELGP  300
TDANYYCVDG NGTNNYYYYD NGGVGQSTTT GHHAPCYVDD DDDDAVGGMG SSYYYDDNSC  360
YAGEGVAVVD DDGVISNENT ITSLHDHIHG FSIQGQDPEG STLTDSFPKT RQAE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926